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Taxonomy File

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The taxonomy file is created by the classify.seqs command. It is a 2 column file with the following format: sequenceName tab taxonomy.

GQY1XT001CJLAE	Bacteria(100);Firmicutes(100);Clostridia(100);Clostridiales(100);Lachnospiraceae(84);unclassified;
GQY1XT001C296C	Bacteria(100);"Bacteroidetes"(100);"Bacteroidia"(95);"Bacteroidales"(95);"Porphyromonadaceae"(91);unclassified;
GQY1XT001A3TJI	Bacteria(100);"Bacteroidetes"(100);"Bacteroidia"(99);"Bacteroidales"(99);"Porphyromonadaceae"(93);unclassified;
GQY1XT001CS2B8	Bacteria(100);"Bacteroidetes"(100);"Bacteroidia"(98);"Bacteroidales"(98);"Porphyromonadaceae"(93);unclassified;
GQY1XT001CD9IB	Bacteria(100);"Bacteroidetes"(99);"Bacteroidia"(97);"Bacteroidales"(97);"Porphyromonadaceae"(90);unclassified;
GQY1XT001ARCB1	Bacteria(100);"Bacteroidetes"(99);"Bacteroidia"(99);"Bacteroidales"(99);"Rikenellaceae"(99);Alistipes(99);
GQY1XT001CNF2P	Bacteria(100);"Bacteroidetes"(100);"Bacteroidia"(99);"Bacteroidales"(99);"Porphyromonadaceae"(99);unclassified;
GQY1XT001CJMDA	Bacteria(100);"Bacteroidetes"(98);"Bacteroidia"(87);"Bacteroidales"(87);unclassified;unclassified;
...