Package index • rchime

Functions for detecting and removing chimeric sequences

Detect and remove chimeric sequences

rchime(): Detect and remove chimeras from your strollur object or data.frame using a de novo approach or alternatively a reference model.
rchime(<strollur>): Detect and remove chimeras from your strollur dataset object.
rchime(<data.frame>): Detect chimeras in your data.frames.

Utility Functions

helper functions

rchime_options(): The rchime_options() function allows you to set vsearch specific optional parameters.
rchime_example(): Get path to rchime example files
silva_gold(): silva_gold