get_bin_types

Get bin table types of a strollur object

Usage

get_bin_types(data)

Arguments

data,

a strollur object

Value

vector of strings

Examples

data <- miseq_sop_example()
#> Added 2425 sequences.
#> Assigned 2425 sequence abundances.
#> Assigned 2425 sequence taxonomies.
#> Assigned 531 otu bins.
#> Assigned 2425 asv bins.
#> Assigned 63 phylotype bins.
#> Assigned 19 samples to treatments.
#> Assigned 531 otu bin taxonomies.
#> Assigned 531 otu bin representative sequences.
#> Added metadata.
#> Added 2 resource references.
#> Added a contigs_report.
get_bin_types(data)
#> [1] "otu"       "asv"       "phylotype"