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new_reference

Source: R/RcppExports.R
new_reference.Rd

Create a reference you can add to your dataset

Usage

new_reference(
  reference_name,
  reference_version = "",
  reference_usage = "",
  reference_note = "",
  reference_url = ""
)

Arguments

reference_name,

a string containing the name of the reference used in the preparing of the sequences. For example: 'silva.bacteria.fasta'.

reference_version,

a string containing the version of the reference used in the preparing of the sequences. For example: '1.38.1'. Default = "".

reference_usage,

a string containing the usage of the reference in your analysis. For example: 'alignment using mothur2' Default = NULL.

reference_note,

a string containing the any additional notes about the reference. Default = "".

reference_url,

a string containing a web address where the reference may be downloaded. Default = "".

Value

a list

See also

[add()]

Examples


reference <- new_reference("silva.bacteria.fasta",
                           "1.38.1",
                           "alignment by mothur2 v1.0 using default options",
                           "",
                           "https://mothur.org/wiki/silva_reference_files/")