Determine if a strollur object has bin taxonomy assignments

Usage

xdev_has_bin_taxonomy(data, type = "otu")

Arguments

data: a strollur object
type: a string indicating the type of bin assignments. Default "otu".

Value

boolean

Examples


 data <- strollur::miseq_sop_example()
#> Added 2425 sequences.
#> Assigned 2425 sequence abundances.
#> Assigned 2425 sequence taxonomies.
#> Assigned 531 otu bins.
#> Assigned 2425 asv bins.
#> Assigned 63 phylotype bins.
#> Assigned 19 samples to treatments.
#> Assigned 171 samples distances.
#> Assigned 531 otu bin taxonomies.
#> Assigned 531 otu bin representative sequences.
#> Added a metadata report.
#> Added 2 resource references.
#> Added a contigs_report report.
 strollur::xdev_has_bin_taxonomy(data)
#> [1] TRUE