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Load strollur object from .rds file

Source: R/load_dataset.R
load_dataset.Rd

The load_dataset function will create a strollur object from an RDS file.

Usage

load_dataset(file)

Arguments

file

a string containing the .rds file name.

Value

a strollur object

See also

[save_dataset()]

Examples


data <- load_dataset(strollur_example("miseq_sop.rds"))
data
#> miseq_sop:
#> 
#>             starts ends nbases ambigs polymers numns   numseqs
#> Minimum:         1  375    249      0        3     0      1.00
#> 2.5%-tile:       1  375    252      0        4     0   2849.08
#> 25%-tile:        1  375    252      0        4     0  28490.75
#> Median:          1  375    253      0        4     0  56981.50
#> 75%-tile:        1  375    253      0        5     0  85472.25
#> 97.5%-tile:      1  375    254      0        6     0 111113.93
#> Maximum:         1  375    256      0        6     0 113963.00
#> Mean:            1  375    252      0        4     0  56981.64
#> 
#> Number of unique seqs: 2425 
#> Total number of seqs: 113963 
#> 
#> Total number of samples: 19 
#> Total number of treatments: 2 
#> Total number of otus: 531 
#> Total number of otu bin classifications: 531 
#> Total number of asvs: 2425 
#> Total number of asv bin classifications: 2425 
#> Total number of phylotypes: 63 
#> Total number of phylotype bin classifications: 63 
#> Total number of sequence classifications: 2425 
#> Total number of resource references: 2 
#> Total number of custom reports: 1 
#> Your dataset includes metadata 
#>